Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC21.18■□□□□ 0.98
Vars2Q3U2A8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vars2Q3U2A8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vars2Q3U2A8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Gm37584-201ENSMUST00000193595 1290 ntBASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vars2Q3U2A8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vars2Q3U2A8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vars2Q3U2A8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vars2Q3U2A8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.15■□□□□ 0.98
Vars2Q3U2A8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vars2Q3U2A8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vars2Q3U2A8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Vars2Q3U2A8 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.15■□□□□ 0.98
Vars2Q3U2A8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vars2Q3U2A8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Vars2Q3U2A8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC21.15■□□□□ 0.98
Vars2Q3U2A8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC21.15■□□□□ 0.98
Vars2Q3U2A8 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.15■□□□□ 0.98
Vars2Q3U2A8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC21.15■□□□□ 0.98
Vars2Q3U2A8 Zfp264-201ENSMUST00000208656 1563 ntBASIC21.14■□□□□ 0.98
Vars2Q3U2A8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vars2Q3U2A8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Vars2Q3U2A8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vars2Q3U2A8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC21.14■□□□□ 0.97
Vars2Q3U2A8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC21.13■□□□□ 0.97
Vars2Q3U2A8 AC084391.1-201ENSMUST00000200651 141 ntBASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Chchd1-203ENSMUST00000224633 557 ntBASIC21.13■□□□□ 0.97
Vars2Q3U2A8 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vars2Q3U2A8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vars2Q3U2A8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vars2Q3U2A8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Vars2Q3U2A8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vars2Q3U2A8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.12■□□□□ 0.97
Vars2Q3U2A8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vars2Q3U2A8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vars2Q3U2A8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vars2Q3U2A8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vars2Q3U2A8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vars2Q3U2A8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vars2Q3U2A8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vars2Q3U2A8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms