Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.55□□□□□ -0.4
Hspg2Q05793 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Hspg2Q05793 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.55□□□□□ -0.4
Hspg2Q05793 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hspg2Q05793 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.55□□□□□ -0.4
Hspg2Q05793 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.54□□□□□ -0.4
Hspg2Q05793 Gm37025-201ENSMUST00000195159 829 ntBASIC12.54□□□□□ -0.4
Hspg2Q05793 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.54□□□□□ -0.4
Hspg2Q05793 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.54□□□□□ -0.4
Hspg2Q05793 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.54□□□□□ -0.4
Hspg2Q05793 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.54□□□□□ -0.4
Hspg2Q05793 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.54□□□□□ -0.4
Hspg2Q05793 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Gm8097-201ENSMUST00000117903 829 ntBASIC12.54□□□□□ -0.4
Hspg2Q05793 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.54□□□□□ -0.4
Hspg2Q05793 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.54□□□□□ -0.4
Hspg2Q05793 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hspg2Q05793 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Gm15467-201ENSMUST00000120582 445 ntBASIC12.53□□□□□ -0.4
Hspg2Q05793 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.53□□□□□ -0.4
Hspg2Q05793 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Hspg2Q05793 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hspg2Q05793 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Hspg2Q05793 Gm27867-201ENSMUST00000184778 125 ntBASIC12.53□□□□□ -0.4
Hspg2Q05793 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.53□□□□□ -0.4
Hspg2Q05793 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hspg2Q05793 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.53□□□□□ -0.4
Hspg2Q05793 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hspg2Q05793 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hspg2Q05793 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.53□□□□□ -0.4
Hspg2Q05793 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hspg2Q05793 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hspg2Q05793 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hspg2Q05793 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hspg2Q05793 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.52□□□□□ -0.4
Hspg2Q05793 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.52□□□□□ -0.4
Hspg2Q05793 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.52□□□□□ -0.4
Hspg2Q05793 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hspg2Q05793 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hspg2Q05793 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hspg2Q05793 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hspg2Q05793 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hspg2Q05793 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.52□□□□□ -0.4
Hspg2Q05793 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.52□□□□□ -0.41
Hspg2Q05793 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hspg2Q05793 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hspg2Q05793 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hspg2Q05793 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hspg2Q05793 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.52□□□□□ -0.41
Hspg2Q05793 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.52□□□□□ -0.41
Hspg2Q05793 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hspg2Q05793 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Hspg2Q05793 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.51□□□□□ -0.41
Hspg2Q05793 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 Gm27321-201ENSMUST00000185021 205 ntBASIC12.51□□□□□ -0.41
Hspg2Q05793 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hspg2Q05793 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hspg2Q05793 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms