Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Smarcc1P97496 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc1P97496 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Smarcc1P97496 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc1P97496 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc1P97496 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.24■□□□□ 0.99
Smarcc1P97496 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.24■□□□□ 0.99
Smarcc1P97496 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc1P97496 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc1P97496 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc1P97496 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Smarcc1P97496 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc1P97496 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Smarcc1P97496 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Smarcc1P97496 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc1P97496 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc1P97496 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.23■□□□□ 0.99
Smarcc1P97496 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcc1P97496 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.23■□□□□ 0.99
Smarcc1P97496 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC21.23■□□□□ 0.99
Smarcc1P97496 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Smarcc1P97496 AC138767.1-201ENSMUST00000222661 415 ntBASIC21.23■□□□□ 0.99
Smarcc1P97496 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcc1P97496 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.23■□□□□ 0.99
Smarcc1P97496 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcc1P97496 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.23■□□□□ 0.99
Smarcc1P97496 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc1P97496 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc1P97496 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc1P97496 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc1P97496 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Smarcc1P97496 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc1P97496 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc1P97496 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc1P97496 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc1P97496 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc1P97496 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc1P97496 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.22■□□□□ 0.99
Smarcc1P97496 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc1P97496 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smarcc1P97496 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.21■□□□□ 0.99
Smarcc1P97496 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Smarcc1P97496 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Smarcc1P97496 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Rprl3-201ENSMUST00000157400 290 ntBASIC21.21■□□□□ 0.99
Smarcc1P97496 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.21■□□□□ 0.99
Smarcc1P97496 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.21■□□□□ 0.99
Smarcc1P97496 Gm6376-201ENSMUST00000209407 580 ntBASIC21.21■□□□□ 0.99
Smarcc1P97496 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.21■□□□□ 0.99
Smarcc1P97496 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Smarcc1P97496 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Smarcc1P97496 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc1P97496 Grk6-206ENSMUST00000224995 2971 ntBASIC21.21■□□□□ 0.99
Smarcc1P97496 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Smarcc1P97496 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Smarcc1P97496 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Gm44450-201ENSMUST00000199528 114 ntBASIC21.2■□□□□ 0.98
Smarcc1P97496 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.2■□□□□ 0.98
Smarcc1P97496 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.2■□□□□ 0.98
Smarcc1P97496 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Wnt10b-204ENSMUST00000226655 1807 ntBASIC21.2■□□□□ 0.98
Smarcc1P97496 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc1P97496 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Smarcc1P97496 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
Smarcc1P97496 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc1P97496 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.19■□□□□ 0.98
Smarcc1P97496 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc1P97496 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc1P97496 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc1P97496 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc1P97496 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc1P97496 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc1P97496 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc1P97496 Gm13312-201ENSMUST00000119631 718 ntBASIC21.19■□□□□ 0.98
Smarcc1P97496 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.19■□□□□ 0.98
Smarcc1P97496 Gm29707-201ENSMUST00000196325 491 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms