Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pdlim4P70271 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pdlim4P70271 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.15□□□□□ -0.14
Pdlim4P70271 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.15□□□□□ -0.14
Pdlim4P70271 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.15□□□□□ -0.14
Pdlim4P70271 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.15□□□□□ -0.14
Pdlim4P70271 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pdlim4P70271 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pdlim4P70271 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pdlim4P70271 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.15□□□□□ -0.14
Pdlim4P70271 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.15□□□□□ -0.15
Pdlim4P70271 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Pdlim4P70271 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim4P70271 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim4P70271 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pdlim4P70271 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim4P70271 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.14□□□□□ -0.15
Pdlim4P70271 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Pdlim4P70271 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.14□□□□□ -0.15
Pdlim4P70271 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Pdlim4P70271 Mir6982-201ENSMUST00000184354 68 ntBASIC14.14□□□□□ -0.15
Pdlim4P70271 Gm38027-201ENSMUST00000192315 235 ntBASIC14.14□□□□□ -0.15
Pdlim4P70271 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim4P70271 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim4P70271 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim4P70271 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim4P70271 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim4P70271 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim4P70271 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim4P70271 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pdlim4P70271 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Pdlim4P70271 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Gm21814-202ENSMUST00000203277 873 ntBASIC14.13□□□□□ -0.15
Pdlim4P70271 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Pdlim4P70271 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.13□□□□□ -0.15
Pdlim4P70271 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.13□□□□□ -0.15
Pdlim4P70271 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.13□□□□□ -0.15
Pdlim4P70271 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Pdlim4P70271 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.13□□□□□ -0.15
Pdlim4P70271 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdlim4P70271 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.12□□□□□ -0.15
Pdlim4P70271 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.12□□□□□ -0.15
Pdlim4P70271 Gm3375-201ENSMUST00000203929 796 ntBASIC14.12□□□□□ -0.15
Pdlim4P70271 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.12□□□□□ -0.15
Pdlim4P70271 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.12□□□□□ -0.15
Pdlim4P70271 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.12□□□□□ -0.15
Pdlim4P70271 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.12□□□□□ -0.15
Pdlim4P70271 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Pdlim4P70271 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pdlim4P70271 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdlim4P70271 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Pdlim4P70271 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdlim4P70271 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Pdlim4P70271 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdlim4P70271 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms