Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm11355-201ENSMUST00000121120 306 ntBASIC16.71■□□□□ 0.27
Lhx1P63006 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx1P63006 Gm9013-201ENSMUST00000132939 882 ntBASIC16.71■□□□□ 0.27
Lhx1P63006 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Lhx1P63006 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Lhx1P63006 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx1P63006 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lhx1P63006 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx1P63006 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Lhx1P63006 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.71■□□□□ 0.27
Lhx1P63006 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx1P63006 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx1P63006 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.71■□□□□ 0.27
Lhx1P63006 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Lhx1P63006 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Lhx1P63006 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Lhx1P63006 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Lhx1P63006 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Lhx1P63006 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lhx1P63006 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Lhx1P63006 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Lhx1P63006 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Lhx1P63006 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Lhx1P63006 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.7■□□□□ 0.26
Lhx1P63006 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx1P63006 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.7■□□□□ 0.26
Lhx1P63006 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Lhx1P63006 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.69■□□□□ 0.26
Lhx1P63006 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Lhx1P63006 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Lhx1P63006 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.69■□□□□ 0.26
Lhx1P63006 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx1P63006 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.68■□□□□ 0.26
Lhx1P63006 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.68■□□□□ 0.26
Lhx1P63006 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.68■□□□□ 0.26
Lhx1P63006 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Gm5587-201ENSMUST00000206270 674 ntBASIC16.68■□□□□ 0.26
Lhx1P63006 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.68■□□□□ 0.26
Lhx1P63006 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Gm10566-201ENSMUST00000086739 996 ntBASIC16.68■□□□□ 0.26
Lhx1P63006 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lhx1P63006 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Lhx1P63006 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx1P63006 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Lhx1P63006 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.67■□□□□ 0.26
Lhx1P63006 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.67■□□□□ 0.26
Lhx1P63006 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.67■□□□□ 0.26
Lhx1P63006 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
Lhx1P63006 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms