Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.82■□□□□ 0.76
Cacnb3P54285 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacnb3P54285 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cacnb3P54285 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cacnb3P54285 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.82■□□□□ 0.76
Cacnb3P54285 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacnb3P54285 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacnb3P54285 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cacnb3P54285 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacnb3P54285 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cacnb3P54285 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cacnb3P54285 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacnb3P54285 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacnb3P54285 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacnb3P54285 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacnb3P54285 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.81■□□□□ 0.76
Cacnb3P54285 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacnb3P54285 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacnb3P54285 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cacnb3P54285 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.81■□□□□ 0.76
Cacnb3P54285 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cacnb3P54285 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.81■□□□□ 0.76
Cacnb3P54285 Gm27459-201ENSMUST00000184860 107 ntBASIC19.81■□□□□ 0.76
Cacnb3P54285 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cacnb3P54285 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.81■□□□□ 0.76
Cacnb3P54285 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cacnb3P54285 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cacnb3P54285 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.81■□□□□ 0.76
Cacnb3P54285 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacnb3P54285 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacnb3P54285 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacnb3P54285 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.8■□□□□ 0.76
Cacnb3P54285 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.8■□□□□ 0.76
Cacnb3P54285 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacnb3P54285 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cacnb3P54285 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cacnb3P54285 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.8■□□□□ 0.76
Cacnb3P54285 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.79■□□□□ 0.76
Cacnb3P54285 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacnb3P54285 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacnb3P54285 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cacnb3P54285 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacnb3P54285 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cacnb3P54285 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Cacnb3P54285 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.79■□□□□ 0.76
Cacnb3P54285 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacnb3P54285 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacnb3P54285 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacnb3P54285 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacnb3P54285 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cacnb3P54285 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacnb3P54285 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacnb3P54285 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacnb3P54285 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacnb3P54285 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacnb3P54285 Gm43347-201ENSMUST00000200226 580 ntBASIC19.78■□□□□ 0.76
Cacnb3P54285 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cacnb3P54285 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.78■□□□□ 0.76
Cacnb3P54285 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacnb3P54285 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacnb3P54285 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.77■□□□□ 0.76
Cacnb3P54285 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacnb3P54285 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacnb3P54285 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cacnb3P54285 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacnb3P54285 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cacnb3P54285 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacnb3P54285 Gm13884-201ENSMUST00000118103 829 ntBASIC19.77■□□□□ 0.76
Cacnb3P54285 Gm28659-201ENSMUST00000188013 759 ntBASIC19.77■□□□□ 0.76
Cacnb3P54285 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacnb3P54285 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.77■□□□□ 0.76
Cacnb3P54285 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacnb3P54285 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacnb3P54285 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.77■□□□□ 0.76
Cacnb3P54285 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cacnb3P54285 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.76■□□□□ 0.75
Cacnb3P54285 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.76■□□□□ 0.75
Cacnb3P54285 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacnb3P54285 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacnb3P54285 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacnb3P54285 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacnb3P54285 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacnb3P54285 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacnb3P54285 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.76■□□□□ 0.75
Cacnb3P54285 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.76■□□□□ 0.75
Cacnb3P54285 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacnb3P54285 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.76■□□□□ 0.75
Cacnb3P54285 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacnb3P54285 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacnb3P54285 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.75■□□□□ 0.75
Cacnb3P54285 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cacnb3P54285 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cacnb3P54285 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms