Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Msh6P54276 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Msh6P54276 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Msh6P54276 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Msh6P54276 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Msh6P54276 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Msh6P54276 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Msh6P54276 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Msh6P54276 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.56■■□□□ 1.04
Msh6P54276 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Msh6P54276 Gm5867-201ENSMUST00000063197 592 ntBASIC21.56■■□□□ 1.04
Msh6P54276 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Msh6P54276 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.56■■□□□ 1.04
Msh6P54276 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Msh6P54276 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Msh6P54276 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Msh6P54276 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Msh6P54276 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.56■■□□□ 1.04
Msh6P54276 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Msh6P54276 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Msh6P54276 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC21.55■■□□□ 1.04
Msh6P54276 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Msh6P54276 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Msh6P54276 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Msh6P54276 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC21.55■■□□□ 1.04
Msh6P54276 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Msh6P54276 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Msh6P54276 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.55■■□□□ 1.04
Msh6P54276 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Msh6P54276 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Msh6P54276 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Msh6P54276 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Msh6P54276 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Msh6P54276 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Msh6P54276 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Msh6P54276 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Msh6P54276 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Msh6P54276 Gm43347-201ENSMUST00000200226 580 ntBASIC21.54■■□□□ 1.04
Msh6P54276 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Msh6P54276 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Msh6P54276 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Msh6P54276 Wnt10b-204ENSMUST00000226655 1807 ntBASIC21.53■■□□□ 1.04
Msh6P54276 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Msh6P54276 Gm13186-201ENSMUST00000118031 316 ntBASIC21.53■■□□□ 1.04
Msh6P54276 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21.53■■□□□ 1.04
Msh6P54276 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.53■■□□□ 1.04
Msh6P54276 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Msh6P54276 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Msh6P54276 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.53■■□□□ 1.04
Msh6P54276 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Msh6P54276 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Msh6P54276 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Msh6P54276 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Msh6P54276 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.52■■□□□ 1.04
Msh6P54276 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.52■■□□□ 1.04
Msh6P54276 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC21.52■■□□□ 1.04
Msh6P54276 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Msh6P54276 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Msh6P54276 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Msh6P54276 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Msh6P54276 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Msh6P54276 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Msh6P54276 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Msh6P54276 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.52■■□□□ 1.03
Msh6P54276 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Msh6P54276 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Msh6P54276 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.51■■□□□ 1.03
Msh6P54276 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Msh6P54276 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Msh6P54276 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Msh6P54276 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Msh6P54276 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Msh6P54276 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Msh6P54276 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Msh6P54276 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.51■■□□□ 1.03
Msh6P54276 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Msh6P54276 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Msh6P54276 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
Msh6P54276 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
Msh6P54276 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC21.51■■□□□ 1.03
Msh6P54276 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.51■■□□□ 1.03
Msh6P54276 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Msh6P54276 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Msh6P54276 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Msh6P54276 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21.51■■□□□ 1.03
Msh6P54276 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.51■■□□□ 1.03
Msh6P54276 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msh6P54276 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msh6P54276 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Msh6P54276 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.5■■□□□ 1.03
Msh6P54276 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.5■■□□□ 1.03
Msh6P54276 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Msh6P54276 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Msh6P54276 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Msh6P54276 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msh6P54276 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msh6P54276 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msh6P54276 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msh6P54276 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Msh6P54276 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms