Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.43■□□□□ 0.38
SftpbP50405 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.43■□□□□ 0.38
SftpbP50405 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.43■□□□□ 0.38
SftpbP50405 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.43■□□□□ 0.38
SftpbP50405 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.43■□□□□ 0.38
SftpbP50405 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
SftpbP50405 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SftpbP50405 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SftpbP50405 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Gm13158-201ENSMUST00000122007 736 ntBASIC17.42■□□□□ 0.38
SftpbP50405 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.42■□□□□ 0.38
SftpbP50405 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.42■□□□□ 0.38
SftpbP50405 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.42■□□□□ 0.38
SftpbP50405 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SftpbP50405 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SftpbP50405 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.41■□□□□ 0.38
SftpbP50405 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SftpbP50405 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SftpbP50405 Gm42545-201ENSMUST00000202755 922 ntBASIC17.41■□□□□ 0.38
SftpbP50405 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.41■□□□□ 0.38
SftpbP50405 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SftpbP50405 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SftpbP50405 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SftpbP50405 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.4■□□□□ 0.38
SftpbP50405 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SftpbP50405 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SftpbP50405 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.4■□□□□ 0.38
SftpbP50405 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SftpbP50405 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SftpbP50405 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SftpbP50405 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SftpbP50405 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SftpbP50405 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SftpbP50405 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.4■□□□□ 0.38
SftpbP50405 Gm18025-201ENSMUST00000221733 862 ntBASIC17.4■□□□□ 0.38
SftpbP50405 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SftpbP50405 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.4■□□□□ 0.38
SftpbP50405 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.4■□□□□ 0.38
SftpbP50405 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SftpbP50405 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SftpbP50405 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.39■□□□□ 0.38
SftpbP50405 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SftpbP50405 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.39■□□□□ 0.37
SftpbP50405 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.39■□□□□ 0.37
SftpbP50405 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SftpbP50405 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
SftpbP50405 Haglr-201ENSMUST00000100000 2085 ntBASIC17.39■□□□□ 0.37
SftpbP50405 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SftpbP50405 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SftpbP50405 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SftpbP50405 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SftpbP50405 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SftpbP50405 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms