Protein–RNA interactions for Protein: P49919

Cdkn1c, Cyclin-dependent kinase inhibitor 1C, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1cP49919 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1cP49919 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cdkn1cP49919 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1cP49919 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cdkn1cP49919 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cdkn1cP49919 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1cP49919 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1cP49919 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1cP49919 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1cP49919 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1cP49919 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1cP49919 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Gm29791-202ENSMUST00000207888 369 ntBASIC18.81■□□□□ 0.6
Cdkn1cP49919 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1cP49919 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.8■□□□□ 0.6
Cdkn1cP49919 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.8■□□□□ 0.6
Cdkn1cP49919 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Gm6139-201ENSMUST00000079261 882 ntBASIC18.8■□□□□ 0.6
Cdkn1cP49919 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdkn1cP49919 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Mir7075-201ENSMUST00000184187 82 ntBASIC18.79■□□□□ 0.6
Cdkn1cP49919 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdkn1cP49919 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.78■□□□□ 0.6
Cdkn1cP49919 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Cdkn1cP49919 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms