Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cxcl12P40224 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.54■□□□□ 0.4
Cxcl12P40224 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cxcl12P40224 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cxcl12P40224 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.53■□□□□ 0.4
Cxcl12P40224 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cxcl12P40224 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cxcl12P40224 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.53■□□□□ 0.4
Cxcl12P40224 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cxcl12P40224 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cxcl12P40224 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cxcl12P40224 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cxcl12P40224 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cxcl12P40224 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cxcl12P40224 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.52■□□□□ 0.4
Cxcl12P40224 Psmb5-202ENSMUST00000227257 622 ntBASIC17.52■□□□□ 0.4
Cxcl12P40224 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cxcl12P40224 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cxcl12P40224 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cxcl12P40224 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cxcl12P40224 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cxcl12P40224 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Cxcl12P40224 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.52■□□□□ 0.4
Cxcl12P40224 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cxcl12P40224 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cxcl12P40224 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cxcl12P40224 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cxcl12P40224 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cxcl12P40224 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.51■□□□□ 0.39
Cxcl12P40224 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cxcl12P40224 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cxcl12P40224 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.51■□□□□ 0.39
Cxcl12P40224 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.51■□□□□ 0.39
Cxcl12P40224 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cxcl12P40224 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.51■□□□□ 0.39
Cxcl12P40224 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cxcl12P40224 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cxcl12P40224 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cxcl12P40224 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cxcl12P40224 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cxcl12P40224 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cxcl12P40224 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cxcl12P40224 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cxcl12P40224 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cxcl12P40224 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cxcl12P40224 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cxcl12P40224 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cxcl12P40224 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cxcl12P40224 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cxcl12P40224 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cxcl12P40224 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cxcl12P40224 Gm12260-201ENSMUST00000122447 411 ntBASIC17.5■□□□□ 0.39
Cxcl12P40224 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cxcl12P40224 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.5■□□□□ 0.39
Cxcl12P40224 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cxcl12P40224 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cxcl12P40224 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cxcl12P40224 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.5■□□□□ 0.39
Cxcl12P40224 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cxcl12P40224 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cxcl12P40224 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.5■□□□□ 0.39
Cxcl12P40224 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cxcl12P40224 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.49■□□□□ 0.39
Cxcl12P40224 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cxcl12P40224 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.49■□□□□ 0.39
Cxcl12P40224 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.49■□□□□ 0.39
Cxcl12P40224 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.49■□□□□ 0.39
Cxcl12P40224 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.49■□□□□ 0.39
Cxcl12P40224 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.49■□□□□ 0.39
Cxcl12P40224 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cxcl12P40224 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cxcl12P40224 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cxcl12P40224 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cxcl12P40224 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cxcl12P40224 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cxcl12P40224 Gm23935-201ENSMUST00000102303 57 ntBASIC17.48■□□□□ 0.39
Cxcl12P40224 Gm24270-201ENSMUST00000102326 57 ntBASIC17.48■□□□□ 0.39
Cxcl12P40224 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.48■□□□□ 0.39
Cxcl12P40224 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cxcl12P40224 Gm24245-201ENSMUST00000157318 57 ntBASIC17.48■□□□□ 0.39
Cxcl12P40224 Gm44450-201ENSMUST00000199528 114 ntBASIC17.48■□□□□ 0.39
Cxcl12P40224 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.48■□□□□ 0.39
Cxcl12P40224 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cxcl12P40224 Gm18421-201ENSMUST00000204122 625 ntBASIC17.48■□□□□ 0.39
Cxcl12P40224 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cxcl12P40224 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cxcl12P40224 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cxcl12P40224 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms