Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd40lgP27548 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cd40lgP27548 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.69■□□□□ 0.1
Cd40lgP27548 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd40lgP27548 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd40lgP27548 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd40lgP27548 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd40lgP27548 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd40lgP27548 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd40lgP27548 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.68■□□□□ 0.1
Cd40lgP27548 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Gm12085-201ENSMUST00000119263 940 ntBASIC15.68■□□□□ 0.1
Cd40lgP27548 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Cd40lgP27548 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd40lgP27548 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cd40lgP27548 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd40lgP27548 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd40lgP27548 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40lgP27548 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd40lgP27548 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40lgP27548 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd40lgP27548 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Cd40lgP27548 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Gm13401-201ENSMUST00000117074 291 ntBASIC15.66■□□□□ 0.1
Cd40lgP27548 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd40lgP27548 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Gm30025-201ENSMUST00000218555 728 ntBASIC15.66■□□□□ 0.1
Cd40lgP27548 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cd40lgP27548 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cd40lgP27548 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Cd40lgP27548 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40lgP27548 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40lgP27548 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40lgP27548 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd40lgP27548 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40lgP27548 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cd40lgP27548 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40lgP27548 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.65■□□□□ 0.1
Cd40lgP27548 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40lgP27548 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.65■□□□□ 0.1
Cd40lgP27548 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40lgP27548 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40lgP27548 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd40lgP27548 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40lgP27548 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cd40lgP27548 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40lgP27548 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40lgP27548 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Cd40lgP27548 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40lgP27548 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40lgP27548 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms