Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm16061-201ENSMUST00000122167 857 ntBASIC15.39■□□□□ 0.05
Cd40P27512 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.39■□□□□ 0.05
Cd40P27512 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.39■□□□□ 0.05
Cd40P27512 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.39■□□□□ 0.05
Cd40P27512 Gm43799-201ENSMUST00000201845 579 ntBASIC15.39■□□□□ 0.05
Cd40P27512 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.39■□□□□ 0.05
Cd40P27512 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd40P27512 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd40P27512 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd40P27512 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd40P27512 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cd40P27512 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd40P27512 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cd40P27512 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd40P27512 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd40P27512 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd40P27512 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cd40P27512 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd40P27512 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd40P27512 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd40P27512 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd40P27512 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd40P27512 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Cd40P27512 Gm15565-201ENSMUST00000118890 427 ntBASIC15.38■□□□□ 0.05
Cd40P27512 Gm13474-201ENSMUST00000122466 815 ntBASIC15.38■□□□□ 0.05
Cd40P27512 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.38■□□□□ 0.05
Cd40P27512 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cd40P27512 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.38■□□□□ 0.05
Cd40P27512 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd40P27512 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd40P27512 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd40P27512 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cd40P27512 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cd40P27512 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd40P27512 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.37■□□□□ 0.05
Cd40P27512 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cd40P27512 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cd40P27512 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cd40P27512 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.37■□□□□ 0.05
Cd40P27512 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.37■□□□□ 0.05
Cd40P27512 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.37■□□□□ 0.05
Cd40P27512 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd40P27512 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cd40P27512 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cd40P27512 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cd40P27512 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.36■□□□□ 0.05
Cd40P27512 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cd40P27512 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.36■□□□□ 0.05
Cd40P27512 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.36■□□□□ 0.05
Cd40P27512 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.36■□□□□ 0.05
Cd40P27512 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.36■□□□□ 0.05
Cd40P27512 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.36■□□□□ 0.05
Cd40P27512 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cd40P27512 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Cd40P27512 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Cd40P27512 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.36■□□□□ 0.05
Cd40P27512 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd40P27512 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.35■□□□□ 0.05
Cd40P27512 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cd40P27512 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Cd40P27512 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cd40P27512 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.35■□□□□ 0.05
Cd40P27512 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cd40P27512 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.35■□□□□ 0.05
Cd40P27512 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
Cd40P27512 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.35■□□□□ 0.05
Cd40P27512 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd40P27512 Gm7370-201ENSMUST00000219471 767 ntBASIC15.35■□□□□ 0.05
Cd40P27512 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms