Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf8P23611 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf8P23611 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf8P23611 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf8P23611 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf8P23611 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.34■□□□□ 0.53
Irf8P23611 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.34■□□□□ 0.53
Irf8P23611 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf8P23611 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Irf8P23611 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf8P23611 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf8P23611 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf8P23611 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Irf8P23611 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf8P23611 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.34■□□□□ 0.53
Irf8P23611 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf8P23611 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Irf8P23611 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.33■□□□□ 0.53
Irf8P23611 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf8P23611 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf8P23611 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Irf8P23611 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf8P23611 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.33■□□□□ 0.52
Irf8P23611 Mir5130-201ENSMUST00000175160 84 ntBASIC18.33■□□□□ 0.52
Irf8P23611 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Irf8P23611 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf8P23611 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Irf8P23611 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf8P23611 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Irf8P23611 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf8P23611 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Irf8P23611 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf8P23611 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Irf8P23611 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Irf8P23611 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.32■□□□□ 0.52
Irf8P23611 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.32■□□□□ 0.52
Irf8P23611 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.32■□□□□ 0.52
Irf8P23611 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf8P23611 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.31■□□□□ 0.52
Irf8P23611 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.31■□□□□ 0.52
Irf8P23611 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Mir1668-201ENSMUST00000184114 107 ntBASIC18.31■□□□□ 0.52
Irf8P23611 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.31■□□□□ 0.52
Irf8P23611 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Irf8P23611 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf8P23611 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.31■□□□□ 0.52
Irf8P23611 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Irf8P23611 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Irf8P23611 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Irf8P23611 Actl10-202ENSMUST00000226583 1501 ntBASIC18.3■□□□□ 0.52
Irf8P23611 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.3■□□□□ 0.52
Irf8P23611 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Irf8P23611 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.3■□□□□ 0.52
Irf8P23611 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.3■□□□□ 0.52
Irf8P23611 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Irf8P23611 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Irf8P23611 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Irf8P23611 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Irf8P23611 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Irf8P23611 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms