Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgn1P18608 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.59■□□□□ 0.09
Hmgn1P18608 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Hmgn1P18608 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgn1P18608 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.59■□□□□ 0.09
Hmgn1P18608 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgn1P18608 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Hmgn1P18608 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgn1P18608 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgn1P18608 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Hmgn1P18608 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgn1P18608 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgn1P18608 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgn1P18608 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgn1P18608 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgn1P18608 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgn1P18608 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgn1P18608 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Hmgn1P18608 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Hmgn1P18608 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.58■□□□□ 0.08
Hmgn1P18608 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.58■□□□□ 0.08
Hmgn1P18608 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Hmgn1P18608 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.58■□□□□ 0.08
Hmgn1P18608 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.58■□□□□ 0.08
Hmgn1P18608 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgn1P18608 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.58■□□□□ 0.08
Hmgn1P18608 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.58■□□□□ 0.08
Hmgn1P18608 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Hmgn1P18608 Gm15375-201ENSMUST00000119510 849 ntBASIC15.57■□□□□ 0.08
Hmgn1P18608 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.57■□□□□ 0.08
Hmgn1P18608 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.57■□□□□ 0.08
Hmgn1P18608 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.57■□□□□ 0.08
Hmgn1P18608 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hmgn1P18608 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.56■□□□□ 0.08
Hmgn1P18608 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Hmgn1P18608 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.56■□□□□ 0.08
Hmgn1P18608 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.56■□□□□ 0.08
Hmgn1P18608 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.56■□□□□ 0.08
Hmgn1P18608 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Hmgn1P18608 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Hmgn1P18608 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Hmgn1P18608 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgn1P18608 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgn1P18608 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgn1P18608 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgn1P18608 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hmgn1P18608 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgn1P18608 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgn1P18608 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgn1P18608 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgn1P18608 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.55■□□□□ 0.08
Hmgn1P18608 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgn1P18608 Gm10849-201ENSMUST00000100397 618 ntBASIC15.55■□□□□ 0.08
Hmgn1P18608 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.55■□□□□ 0.08
Hmgn1P18608 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Hmgn1P18608 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
Hmgn1P18608 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hmgn1P18608 Gm5408-201ENSMUST00000197998 747 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms