Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.69■□□□□ 0.74
Usp53P15975 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Usp53P15975 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Usp53P15975 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp53P15975 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp53P15975 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp53P15975 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp53P15975 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp53P15975 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp53P15975 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.68■□□□□ 0.74
Usp53P15975 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Usp53P15975 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp53P15975 Gm25016-201ENSMUST00000158399 131 ntBASIC19.68■□□□□ 0.74
Usp53P15975 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.68■□□□□ 0.74
Usp53P15975 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp53P15975 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp53P15975 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Usp53P15975 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Usp53P15975 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Usp53P15975 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Usp53P15975 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp53P15975 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Usp53P15975 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.66■□□□□ 0.74
Usp53P15975 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Gm9013-201ENSMUST00000132939 882 ntBASIC19.66■□□□□ 0.74
Usp53P15975 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.66■□□□□ 0.74
Usp53P15975 Gm29518-201ENSMUST00000190858 372 ntBASIC19.66■□□□□ 0.74
Usp53P15975 Gm37722-201ENSMUST00000193757 208 ntBASIC19.66■□□□□ 0.74
Usp53P15975 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Usp53P15975 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Usp53P15975 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Usp53P15975 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Usp53P15975 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp53P15975 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp53P15975 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.65■□□□□ 0.74
Usp53P15975 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp53P15975 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp53P15975 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp53P15975 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.65■□□□□ 0.74
Usp53P15975 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usp53P15975 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.65■□□□□ 0.74
Usp53P15975 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp53P15975 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usp53P15975 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp53P15975 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp53P15975 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp53P15975 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp53P15975 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp53P15975 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp53P15975 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp53P15975 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp53P15975 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Usp53P15975 Phf7-203ENSMUST00000226565 1971 ntBASIC19.64■□□□□ 0.74
Usp53P15975 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Usp53P15975 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.64■□□□□ 0.74
Usp53P15975 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp53P15975 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp53P15975 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Usp53P15975 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Usp53P15975 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp53P15975 Gm17808-201ENSMUST00000200859 894 ntBASIC19.64■□□□□ 0.73
Usp53P15975 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp53P15975 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp53P15975 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp53P15975 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms