Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh3P13705 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh3P13705 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh3P13705 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh3P13705 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh3P13705 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh3P13705 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh3P13705 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Msh3P13705 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Msh3P13705 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Msh3P13705 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Msh3P13705 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.69■□□□□ 0.58
Msh3P13705 Gm10252-201ENSMUST00000209541 832 ntBASIC18.69■□□□□ 0.58
Msh3P13705 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh3P13705 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh3P13705 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.69■□□□□ 0.58
Msh3P13705 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh3P13705 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Msh3P13705 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh3P13705 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Msh3P13705 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
Msh3P13705 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.68■□□□□ 0.58
Msh3P13705 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.68■□□□□ 0.58
Msh3P13705 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Msh3P13705 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.68■□□□□ 0.58
Msh3P13705 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh3P13705 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.68■□□□□ 0.58
Msh3P13705 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh3P13705 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Msh3P13705 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh3P13705 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh3P13705 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.67■□□□□ 0.58
Msh3P13705 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh3P13705 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Msh3P13705 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.67■□□□□ 0.58
Msh3P13705 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh3P13705 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh3P13705 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Msh3P13705 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Msh3P13705 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh3P13705 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.67■□□□□ 0.58
Msh3P13705 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh3P13705 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh3P13705 Gm13186-201ENSMUST00000118031 316 ntBASIC18.66■□□□□ 0.58
Msh3P13705 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh3P13705 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh3P13705 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh3P13705 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh3P13705 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.66■□□□□ 0.58
Msh3P13705 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh3P13705 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh3P13705 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh3P13705 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh3P13705 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Msh3P13705 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.65■□□□□ 0.58
Msh3P13705 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Msh3P13705 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Msh3P13705 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Gm16061-201ENSMUST00000122167 857 ntBASIC18.65■□□□□ 0.58
Msh3P13705 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Msh3P13705 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Msh3P13705 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Msh3P13705 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh3P13705 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Msh3P13705 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh3P13705 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Msh3P13705 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh3P13705 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.64■□□□□ 0.57
Msh3P13705 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh3P13705 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Msh3P13705 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh3P13705 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Msh3P13705 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh3P13705 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Msh3P13705 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms