Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccl1P10146 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl1P10146 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl1P10146 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl1P10146 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl1P10146 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl1P10146 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ccl1P10146 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccl1P10146 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccl1P10146 Gm13534-201ENSMUST00000121169 513 ntBASIC13.27□□□□□ -0.29
Ccl1P10146 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccl1P10146 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.27□□□□□ -0.29
Ccl1P10146 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccl1P10146 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ccl1P10146 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccl1P10146 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl1P10146 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccl1P10146 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.26□□□□□ -0.29
Ccl1P10146 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Ccl1P10146 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Ccl1P10146 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccl1P10146 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccl1P10146 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl1P10146 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.25□□□□□ -0.29
Ccl1P10146 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccl1P10146 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccl1P10146 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.25□□□□□ -0.29
Ccl1P10146 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccl1P10146 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ccl1P10146 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccl1P10146 Gm13146-201ENSMUST00000118508 780 ntBASIC13.25□□□□□ -0.29
Ccl1P10146 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Ccl1P10146 Gm9988-201ENSMUST00000069786 435 ntBASIC13.25□□□□□ -0.29
Ccl1P10146 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl1P10146 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl1P10146 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl1P10146 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccl1P10146 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms