Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PdgfrbP05622 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.18■□□□□ 0.34
PdgfrbP05622 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PdgfrbP05622 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PdgfrbP05622 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.18■□□□□ 0.34
PdgfrbP05622 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.18■□□□□ 0.34
PdgfrbP05622 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Gm7791-201ENSMUST00000219066 539 ntBASIC17.18■□□□□ 0.34
PdgfrbP05622 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.18■□□□□ 0.34
PdgfrbP05622 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PdgfrbP05622 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.18■□□□□ 0.34
PdgfrbP05622 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PdgfrbP05622 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdgfrbP05622 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PdgfrbP05622 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PdgfrbP05622 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.17■□□□□ 0.34
PdgfrbP05622 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
PdgfrbP05622 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PdgfrbP05622 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PdgfrbP05622 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PdgfrbP05622 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PdgfrbP05622 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.17■□□□□ 0.34
PdgfrbP05622 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PdgfrbP05622 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PdgfrbP05622 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PdgfrbP05622 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PdgfrbP05622 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PdgfrbP05622 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PdgfrbP05622 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PdgfrbP05622 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.16■□□□□ 0.34
PdgfrbP05622 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PdgfrbP05622 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PdgfrbP05622 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.16■□□□□ 0.34
PdgfrbP05622 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PdgfrbP05622 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.16■□□□□ 0.34
PdgfrbP05622 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.16■□□□□ 0.34
PdgfrbP05622 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PdgfrbP05622 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PdgfrbP05622 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PdgfrbP05622 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PdgfrbP05622 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PdgfrbP05622 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PdgfrbP05622 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PdgfrbP05622 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.15■□□□□ 0.34
PdgfrbP05622 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Gm37055-201ENSMUST00000191866 133 ntBASIC17.15■□□□□ 0.34
PdgfrbP05622 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.15■□□□□ 0.34
PdgfrbP05622 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PdgfrbP05622 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdgfrbP05622 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.14■□□□□ 0.33
PdgfrbP05622 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.14■□□□□ 0.33
PdgfrbP05622 Il3ra-202ENSMUST00000223589 738 ntBASIC17.14■□□□□ 0.33
PdgfrbP05622 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PdgfrbP05622 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.14■□□□□ 0.33
PdgfrbP05622 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdgfrbP05622 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms