Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igh-VJ558P01758 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igh-VJ558P01758 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Igh-VJ558P01758 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igh-VJ558P01758 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igh-VJ558P01758 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Igh-VJ558P01758 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igh-VJ558P01758 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igh-VJ558P01758 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igh-VJ558P01758 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Igh-VJ558P01758 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igh-VJ558P01758 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igh-VJ558P01758 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igh-VJ558P01758 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Igh-VJ558P01758 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms