Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Gm11452-201ENSMUST00000122376 690 ntBASIC20.73■□□□□ 0.91
Setdb1O88974 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.73■□□□□ 0.91
Setdb1O88974 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Setdb1O88974 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.73■□□□□ 0.91
Setdb1O88974 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Setdb1O88974 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Setdb1O88974 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Setdb1O88974 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.72■□□□□ 0.91
Setdb1O88974 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Setdb1O88974 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Setdb1O88974 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Setdb1O88974 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Setdb1O88974 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.72■□□□□ 0.91
Setdb1O88974 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.72■□□□□ 0.91
Setdb1O88974 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Setdb1O88974 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Setdb1O88974 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Setdb1O88974 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Setdb1O88974 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.71■□□□□ 0.91
Setdb1O88974 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Setdb1O88974 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.71■□□□□ 0.91
Setdb1O88974 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.71■□□□□ 0.91
Setdb1O88974 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.71■□□□□ 0.91
Setdb1O88974 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Setdb1O88974 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Setdb1O88974 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Setdb1O88974 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Setdb1O88974 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Setdb1O88974 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Setdb1O88974 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Setdb1O88974 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Setdb1O88974 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Setdb1O88974 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Setdb1O88974 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Setdb1O88974 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.7■□□□□ 0.9
Setdb1O88974 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Setdb1O88974 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Setdb1O88974 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Setdb1O88974 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Setdb1O88974 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Setdb1O88974 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.69■□□□□ 0.9
Setdb1O88974 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Setdb1O88974 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Setdb1O88974 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Setdb1O88974 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Setdb1O88974 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Setdb1O88974 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Setdb1O88974 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Setdb1O88974 Gm8969-201ENSMUST00000199694 526 ntBASIC20.69■□□□□ 0.9
Setdb1O88974 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.69■□□□□ 0.9
Setdb1O88974 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Setdb1O88974 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Setdb1O88974 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.69■□□□□ 0.9
Setdb1O88974 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Setdb1O88974 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Setdb1O88974 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.68■□□□□ 0.9
Setdb1O88974 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.68■□□□□ 0.9
Setdb1O88974 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.68■□□□□ 0.9
Setdb1O88974 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.68■□□□□ 0.9
Setdb1O88974 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Setdb1O88974 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.68■□□□□ 0.9
Setdb1O88974 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Setdb1O88974 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.67■□□□□ 0.9
Setdb1O88974 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Setdb1O88974 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Setdb1O88974 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Gm18195-201ENSMUST00000207604 706 ntBASIC20.67■□□□□ 0.9
Setdb1O88974 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Setdb1O88974 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.67■□□□□ 0.9
Setdb1O88974 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Setdb1O88974 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Setdb1O88974 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Setdb1O88974 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Setdb1O88974 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms