Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.36■□□□□ 0.21
Best1O88870 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Best1O88870 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.36■□□□□ 0.21
Best1O88870 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Best1O88870 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Best1O88870 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.36■□□□□ 0.21
Best1O88870 Phf7-203ENSMUST00000226565 1971 ntBASIC16.36■□□□□ 0.21
Best1O88870 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Best1O88870 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Best1O88870 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.36■□□□□ 0.21
Best1O88870 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Best1O88870 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Best1O88870 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Best1O88870 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.35■□□□□ 0.21
Best1O88870 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.35■□□□□ 0.21
Best1O88870 Gm6623-201ENSMUST00000173570 544 ntBASIC16.35■□□□□ 0.21
Best1O88870 Gm27704-201ENSMUST00000185094 107 ntBASIC16.35■□□□□ 0.21
Best1O88870 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Best1O88870 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Best1O88870 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.35■□□□□ 0.21
Best1O88870 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Best1O88870 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Best1O88870 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Best1O88870 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Best1O88870 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Best1O88870 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Best1O88870 Gm44450-201ENSMUST00000199528 114 ntBASIC16.34■□□□□ 0.21
Best1O88870 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Best1O88870 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.33■□□□□ 0.21
Best1O88870 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Best1O88870 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Best1O88870 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Best1O88870 Rarb-207ENSMUST00000225921 2756 ntBASIC16.33■□□□□ 0.21
Best1O88870 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Best1O88870 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Best1O88870 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Best1O88870 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Best1O88870 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Best1O88870 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.33■□□□□ 0.2
Best1O88870 Gm7284-201ENSMUST00000131667 944 ntBASIC16.33■□□□□ 0.2
Best1O88870 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Best1O88870 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Best1O88870 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.33■□□□□ 0.2
Best1O88870 Gm45328-201ENSMUST00000210942 917 ntBASIC16.33■□□□□ 0.2
Best1O88870 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.33■□□□□ 0.2
Best1O88870 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.33■□□□□ 0.2
Best1O88870 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Best1O88870 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Best1O88870 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Best1O88870 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Best1O88870 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Best1O88870 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.33■□□□□ 0.2
Best1O88870 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Best1O88870 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.33■□□□□ 0.2
Best1O88870 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Best1O88870 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Best1O88870 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Best1O88870 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Best1O88870 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Best1O88870 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Best1O88870 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Best1O88870 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Best1O88870 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.32■□□□□ 0.2
Best1O88870 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Best1O88870 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Best1O88870 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.32■□□□□ 0.2
Best1O88870 Gm29707-201ENSMUST00000196325 491 ntBASIC16.32■□□□□ 0.2
Best1O88870 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.32■□□□□ 0.2
Best1O88870 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Best1O88870 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms