Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cops3O88543 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.25■□□□□ 0.03
Cops3O88543 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.25■□□□□ 0.03
Cops3O88543 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Gm15375-201ENSMUST00000119510 849 ntBASIC15.25■□□□□ 0.03
Cops3O88543 Gm6576-201ENSMUST00000169678 883 ntBASIC15.25■□□□□ 0.03
Cops3O88543 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Gm2559-201ENSMUST00000201323 363 ntBASIC15.25■□□□□ 0.03
Cops3O88543 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.25■□□□□ 0.03
Cops3O88543 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.25■□□□□ 0.03
Cops3O88543 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cops3O88543 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cops3O88543 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.24■□□□□ 0.03
Cops3O88543 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Gm37179-201ENSMUST00000194862 823 ntBASIC15.24■□□□□ 0.03
Cops3O88543 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.24■□□□□ 0.03
Cops3O88543 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.24■□□□□ 0.03
Cops3O88543 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Dio3-201ENSMUST00000097228 1449 ntBASIC15.24■□□□□ 0.03
Cops3O88543 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops3O88543 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops3O88543 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops3O88543 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops3O88543 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops3O88543 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops3O88543 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops3O88543 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cops3O88543 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.23■□□□□ 0.03
Cops3O88543 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.23■□□□□ 0.03
Cops3O88543 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cops3O88543 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops3O88543 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops3O88543 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops3O88543 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.22■□□□□ 0.03
Cops3O88543 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.22■□□□□ 0.03
Cops3O88543 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Dancr-204ENSMUST00000132389 2347 ntBASIC15.22■□□□□ 0.03
Cops3O88543 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.22■□□□□ 0.03
Cops3O88543 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cops3O88543 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Gm12933-201ENSMUST00000120203 872 ntBASIC15.22■□□□□ 0.03
Cops3O88543 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.22■□□□□ 0.03
Cops3O88543 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.22■□□□□ 0.03
Cops3O88543 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.22■□□□□ 0.03
Cops3O88543 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Cops3O88543 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Cops3O88543 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cops3O88543 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops3O88543 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cops3O88543 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cops3O88543 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops3O88543 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cops3O88543 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops3O88543 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops3O88543 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms