Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm10139O88245 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC10.38□□□□□ -0.75
Gm10139O88245 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Gm10139O88245 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC10.37□□□□□ -0.75
Gm10139O88245 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 H2-K2-201ENSMUST00000174250 1049 ntBASIC10.37□□□□□ -0.75
Gm10139O88245 Gm9694-201ENSMUST00000193347 1189 ntBASIC10.37□□□□□ -0.75
Gm10139O88245 Gm43183-201ENSMUST00000200632 547 ntBASIC10.37□□□□□ -0.75
Gm10139O88245 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gm10139O88245 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Gm10139O88245 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC10.37□□□□□ -0.75
Gm10139O88245 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Gm10139O88245 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 AL590614.2-201ENSMUST00000225374 1937 ntBASIC10.37□□□□□ -0.75
Gm10139O88245 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC10.37□□□□□ -0.75
Gm10139O88245 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm10139O88245 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm10139O88245 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Gm10139O88245 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm10139O88245 Nrn1-203ENSMUST00000223611 1443 ntBASIC10.36□□□□□ -0.75
Gm10139O88245 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Gm10139O88245 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Gm10139O88245 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm10139O88245 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm10139O88245 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Gm10139O88245 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC10.36□□□□□ -0.75
Gm10139O88245 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 CT010444.2-201ENSMUST00000217877 1629 ntBASIC10.36□□□□□ -0.75
Gm10139O88245 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm10139O88245 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm10139O88245 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Gm10139O88245 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Gm10139O88245 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Gm10139O88245 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Gm10139O88245 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm10139O88245 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Gm12441-201ENSMUST00000121806 588 ntBASIC10.35□□□□□ -0.75
Gm10139O88245 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm10139O88245 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10139O88245 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms