Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ttc3O88196 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ttc3O88196 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ttc3O88196 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ttc3O88196 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ttc3O88196 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ttc3O88196 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.81■□□□□ 0.44
Ttc3O88196 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ttc3O88196 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ttc3O88196 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ttc3O88196 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ttc3O88196 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ttc3O88196 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ttc3O88196 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.8■□□□□ 0.44
Ttc3O88196 Mir3081-201ENSMUST00000175305 84 ntBASIC17.8■□□□□ 0.44
Ttc3O88196 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ttc3O88196 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.8■□□□□ 0.44
Ttc3O88196 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.8■□□□□ 0.44
Ttc3O88196 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ttc3O88196 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.79■□□□□ 0.44
Ttc3O88196 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.79■□□□□ 0.44
Ttc3O88196 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.79■□□□□ 0.44
Ttc3O88196 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.79■□□□□ 0.44
Ttc3O88196 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.79■□□□□ 0.44
Ttc3O88196 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Ttc3O88196 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ttc3O88196 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ttc3O88196 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.79■□□□□ 0.44
Ttc3O88196 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ttc3O88196 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ttc3O88196 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.78■□□□□ 0.44
Ttc3O88196 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ttc3O88196 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ttc3O88196 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.78■□□□□ 0.44
Ttc3O88196 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ttc3O88196 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ttc3O88196 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ttc3O88196 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ttc3O88196 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.78■□□□□ 0.44
Ttc3O88196 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.78■□□□□ 0.44
Ttc3O88196 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ttc3O88196 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ttc3O88196 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Ttc3O88196 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ttc3O88196 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ttc3O88196 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ttc3O88196 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ttc3O88196 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ttc3O88196 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ttc3O88196 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ttc3O88196 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.77■□□□□ 0.44
Ttc3O88196 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ttc3O88196 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.77■□□□□ 0.44
Ttc3O88196 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ttc3O88196 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.77■□□□□ 0.44
Ttc3O88196 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ttc3O88196 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ttc3O88196 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ttc3O88196 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ttc3O88196 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ttc3O88196 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc3O88196 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc3O88196 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ttc3O88196 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ttc3O88196 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc3O88196 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.76■□□□□ 0.43
Ttc3O88196 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc3O88196 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
Ttc3O88196 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.76■□□□□ 0.43
Ttc3O88196 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc3O88196 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc3O88196 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ttc3O88196 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc3O88196 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.75■□□□□ 0.43
Ttc3O88196 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.75■□□□□ 0.43
Ttc3O88196 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms