Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SgceO70258 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SgceO70258 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SgceO70258 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.21■□□□□ 0.03
SgceO70258 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgceO70258 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
SgceO70258 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SgceO70258 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SgceO70258 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.2■□□□□ 0.02
SgceO70258 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SgceO70258 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SgceO70258 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.2■□□□□ 0.02
SgceO70258 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.2■□□□□ 0.02
SgceO70258 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgceO70258 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SgceO70258 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.19■□□□□ 0.02
SgceO70258 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SgceO70258 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SgceO70258 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SgceO70258 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SgceO70258 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SgceO70258 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.19■□□□□ 0.02
SgceO70258 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SgceO70258 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SgceO70258 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SgceO70258 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SgceO70258 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.18■□□□□ 0.02
SgceO70258 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.18■□□□□ 0.02
SgceO70258 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.18■□□□□ 0.02
SgceO70258 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SgceO70258 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SgceO70258 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SgceO70258 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SgceO70258 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SgceO70258 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SgceO70258 Gm24841-201ENSMUST00000158676 357 ntBASIC15.17■□□□□ 0.02
SgceO70258 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.17■□□□□ 0.02
SgceO70258 Gm27011-201ENSMUST00000182352 972 ntBASIC15.17■□□□□ 0.02
SgceO70258 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.17■□□□□ 0.02
SgceO70258 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SgceO70258 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SgceO70258 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SgceO70258 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SgceO70258 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms