Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cldn5O54942 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cldn5O54942 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.66■□□□□ 0.42
Cldn5O54942 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldn5O54942 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldn5O54942 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.66■□□□□ 0.42
Cldn5O54942 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldn5O54942 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Cldn5O54942 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldn5O54942 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn5O54942 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cldn5O54942 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cldn5O54942 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.65■□□□□ 0.42
Cldn5O54942 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cldn5O54942 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cldn5O54942 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn5O54942 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cldn5O54942 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cldn5O54942 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn5O54942 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.64■□□□□ 0.41
Cldn5O54942 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cldn5O54942 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn5O54942 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn5O54942 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.64■□□□□ 0.41
Cldn5O54942 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.64■□□□□ 0.41
Cldn5O54942 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.64■□□□□ 0.41
Cldn5O54942 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn5O54942 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn5O54942 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cldn5O54942 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn5O54942 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn5O54942 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cldn5O54942 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.63■□□□□ 0.41
Cldn5O54942 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cldn5O54942 Gm11355-201ENSMUST00000121120 306 ntBASIC17.63■□□□□ 0.41
Cldn5O54942 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.63■□□□□ 0.41
Cldn5O54942 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn5O54942 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cldn5O54942 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.62■□□□□ 0.41
Cldn5O54942 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.62■□□□□ 0.41
Cldn5O54942 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.62■□□□□ 0.41
Cldn5O54942 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Cldn5O54942 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.62■□□□□ 0.41
Cldn5O54942 Gm21362-201ENSMUST00000194272 928 ntBASIC17.62■□□□□ 0.41
Cldn5O54942 Gm5587-201ENSMUST00000206270 674 ntBASIC17.62■□□□□ 0.41
Cldn5O54942 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn5O54942 Gm7367-201ENSMUST00000057611 492 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms