Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Dkk1O54908 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.92□□□□□ -0.02
Dkk1O54908 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.92□□□□□ -0.02
Dkk1O54908 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.92□□□□□ -0.02
Dkk1O54908 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.92□□□□□ -0.02
Dkk1O54908 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Dkk1O54908 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Dkk1O54908 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Dkk1O54908 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.92□□□□□ -0.02
Dkk1O54908 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.92□□□□□ -0.02
Dkk1O54908 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.92□□□□□ -0.02
Dkk1O54908 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Dkk1O54908 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.92□□□□□ -0.02
Dkk1O54908 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC14.92□□□□□ -0.02
Dkk1O54908 Timm23-208ENSMUST00000226683 750 ntBASIC14.92□□□□□ -0.02
Dkk1O54908 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.92□□□□□ -0.02
Dkk1O54908 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Dkk1O54908 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Dkk1O54908 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Dkk1O54908 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Dkk1O54908 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Dkk1O54908 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.91□□□□□ -0.02
Dkk1O54908 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.91□□□□□ -0.02
Dkk1O54908 Gm8190-201ENSMUST00000199603 586 ntBASIC14.91□□□□□ -0.02
Dkk1O54908 AC134860.5-201ENSMUST00000225071 1249 ntBASIC14.91□□□□□ -0.02
Dkk1O54908 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Dkk1O54908 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Dkk1O54908 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Dkk1O54908 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Dkk1O54908 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.9□□□□□ -0.02
Dkk1O54908 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Gm26831-201ENSMUST00000181458 1380 ntBASIC14.9□□□□□ -0.02
Dkk1O54908 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Gm4732-201ENSMUST00000118778 473 ntBASIC14.9□□□□□ -0.02
Dkk1O54908 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.9□□□□□ -0.02
Dkk1O54908 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Gm28180-201ENSMUST00000189608 722 ntBASIC14.9□□□□□ -0.02
Dkk1O54908 Gm17983-201ENSMUST00000190766 594 ntBASIC14.9□□□□□ -0.02
Dkk1O54908 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.9□□□□□ -0.02
Dkk1O54908 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.9□□□□□ -0.02
Dkk1O54908 Gm3375-201ENSMUST00000203929 796 ntBASIC14.9□□□□□ -0.02
Dkk1O54908 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.9□□□□□ -0.02
Dkk1O54908 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Dkk1O54908 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Dkk1O54908 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Dkk1O54908 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Dkk1O54908 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Dkk1O54908 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Dkk1O54908 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Dkk1O54908 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Dkk1O54908 Gm18829-201ENSMUST00000188150 1622 ntBASIC14.89□□□□□ -0.03
Dkk1O54908 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Dkk1O54908 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.89□□□□□ -0.03
Dkk1O54908 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms