Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ChkaO54804 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ChkaO54804 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ChkaO54804 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.18■□□□□ 0.34
ChkaO54804 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ChkaO54804 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ChkaO54804 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ChkaO54804 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ChkaO54804 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ChkaO54804 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ChkaO54804 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ChkaO54804 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ChkaO54804 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ChkaO54804 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
ChkaO54804 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ChkaO54804 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ChkaO54804 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ChkaO54804 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ChkaO54804 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ChkaO54804 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ChkaO54804 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ChkaO54804 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.16■□□□□ 0.34
ChkaO54804 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ChkaO54804 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ChkaO54804 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ChkaO54804 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ChkaO54804 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ChkaO54804 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
ChkaO54804 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ChkaO54804 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ChkaO54804 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ChkaO54804 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.15■□□□□ 0.34
ChkaO54804 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.15■□□□□ 0.34
ChkaO54804 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ChkaO54804 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ChkaO54804 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ChkaO54804 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.15■□□□□ 0.34
ChkaO54804 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ChkaO54804 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ChkaO54804 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ChkaO54804 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ChkaO54804 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
ChkaO54804 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.15■□□□□ 0.34
ChkaO54804 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
ChkaO54804 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.15■□□□□ 0.34
ChkaO54804 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ChkaO54804 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
ChkaO54804 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ChkaO54804 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ChkaO54804 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ChkaO54804 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ChkaO54804 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ChkaO54804 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ChkaO54804 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.13■□□□□ 0.33
ChkaO54804 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ChkaO54804 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ChkaO54804 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ChkaO54804 Gm15378-201ENSMUST00000121894 207 ntBASIC17.13■□□□□ 0.33
ChkaO54804 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ChkaO54804 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.13■□□□□ 0.33
ChkaO54804 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms