Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.53■□□□□ 0.4
Sdc4O35988 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc4O35988 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sdc4O35988 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc4O35988 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc4O35988 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
Sdc4O35988 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sdc4O35988 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc4O35988 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc4O35988 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc4O35988 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc4O35988 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc4O35988 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sdc4O35988 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.53■□□□□ 0.4
Sdc4O35988 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sdc4O35988 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc4O35988 Actl10-202ENSMUST00000226583 1501 ntBASIC17.52■□□□□ 0.4
Sdc4O35988 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc4O35988 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc4O35988 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc4O35988 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc4O35988 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc4O35988 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc4O35988 Gm14859-201ENSMUST00000117752 357 ntBASIC17.52■□□□□ 0.4
Sdc4O35988 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.52■□□□□ 0.4
Sdc4O35988 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc4O35988 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc4O35988 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc4O35988 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc4O35988 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc4O35988 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc4O35988 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Sdc4O35988 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.51■□□□□ 0.39
Sdc4O35988 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.51■□□□□ 0.39
Sdc4O35988 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.51■□□□□ 0.39
Sdc4O35988 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Gm10566-201ENSMUST00000086739 996 ntBASIC17.51■□□□□ 0.39
Sdc4O35988 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sdc4O35988 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Sdc4O35988 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc4O35988 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.5■□□□□ 0.39
Sdc4O35988 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sdc4O35988 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sdc4O35988 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Sdc4O35988 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc4O35988 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sdc4O35988 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc4O35988 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sdc4O35988 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc4O35988 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sdc4O35988 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc4O35988 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.49■□□□□ 0.39
Sdc4O35988 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.49■□□□□ 0.39
Sdc4O35988 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc4O35988 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc4O35988 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc4O35988 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc4O35988 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc4O35988 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc4O35988 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.48■□□□□ 0.39
Sdc4O35988 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Sdc4O35988 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Gm27000-201ENSMUST00000182943 842 ntBASIC17.48■□□□□ 0.39
Sdc4O35988 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.48■□□□□ 0.39
Sdc4O35988 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.48■□□□□ 0.39
Sdc4O35988 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms