Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nr1i3O35627 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1i3O35627 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1i3O35627 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1i3O35627 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1i3O35627 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1i3O35627 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nr1i3O35627 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.27■□□□□ 0.52
Nr1i3O35627 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nr1i3O35627 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1i3O35627 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nr1i3O35627 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1i3O35627 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Nr1i3O35627 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nr1i3O35627 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nr1i3O35627 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nr1i3O35627 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nr1i3O35627 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.26■□□□□ 0.51
Nr1i3O35627 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nr1i3O35627 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.26■□□□□ 0.51
Nr1i3O35627 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1i3O35627 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.25■□□□□ 0.51
Nr1i3O35627 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nr1i3O35627 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.25■□□□□ 0.51
Nr1i3O35627 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Il3ra-202ENSMUST00000223589 738 ntBASIC18.25■□□□□ 0.51
Nr1i3O35627 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nr1i3O35627 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.25■□□□□ 0.51
Nr1i3O35627 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Nr1i3O35627 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1i3O35627 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Nr1i3O35627 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.24■□□□□ 0.51
Nr1i3O35627 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1i3O35627 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1i3O35627 Gm27000-201ENSMUST00000182943 842 ntBASIC18.24■□□□□ 0.51
Nr1i3O35627 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.24■□□□□ 0.51
Nr1i3O35627 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.24■□□□□ 0.51
Nr1i3O35627 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1i3O35627 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1i3O35627 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1i3O35627 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Nr1i3O35627 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1i3O35627 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1i3O35627 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1i3O35627 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.24■□□□□ 0.51
Nr1i3O35627 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1i3O35627 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1i3O35627 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.23■□□□□ 0.51
Nr1i3O35627 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nr1i3O35627 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.23■□□□□ 0.51
Nr1i3O35627 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.23■□□□□ 0.51
Nr1i3O35627 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Nr1i3O35627 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1i3O35627 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nr1i3O35627 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.22■□□□□ 0.51
Nr1i3O35627 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nr1i3O35627 Gm7638-201ENSMUST00000121348 967 ntBASIC18.22■□□□□ 0.51
Nr1i3O35627 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Nr1i3O35627 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.22■□□□□ 0.51
Nr1i3O35627 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nr1i3O35627 Gm38027-201ENSMUST00000192315 235 ntBASIC18.22■□□□□ 0.51
Nr1i3O35627 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.22■□□□□ 0.51
Nr1i3O35627 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.22■□□□□ 0.51
Nr1i3O35627 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.22■□□□□ 0.51
Nr1i3O35627 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nr1i3O35627 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms