Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Npc1O35604 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Npc1O35604 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.62■□□□□ 0.25
Npc1O35604 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.62■□□□□ 0.25
Npc1O35604 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Gm45058-201ENSMUST00000205810 766 ntBASIC16.62■□□□□ 0.25
Npc1O35604 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.62■□□□□ 0.25
Npc1O35604 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Npc1O35604 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.61■□□□□ 0.25
Npc1O35604 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Npc1O35604 Gm16061-201ENSMUST00000122167 857 ntBASIC16.61■□□□□ 0.25
Npc1O35604 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.61■□□□□ 0.25
Npc1O35604 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.61■□□□□ 0.25
Npc1O35604 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Npc1O35604 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Npc1O35604 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Npc1O35604 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npc1O35604 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.6■□□□□ 0.25
Npc1O35604 Gm7791-201ENSMUST00000219066 539 ntBASIC16.6■□□□□ 0.25
Npc1O35604 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npc1O35604 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npc1O35604 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.6■□□□□ 0.25
Npc1O35604 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npc1O35604 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Npc1O35604 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Npc1O35604 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Npc1O35604 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Npc1O35604 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.59■□□□□ 0.25
Npc1O35604 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Npc1O35604 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Npc1O35604 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.59■□□□□ 0.25
Npc1O35604 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Npc1O35604 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.59■□□□□ 0.25
Npc1O35604 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Npc1O35604 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.59■□□□□ 0.25
Npc1O35604 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Npc1O35604 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Npc1O35604 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Npc1O35604 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Npc1O35604 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Npc1O35604 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Npc1O35604 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Npc1O35604 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.58■□□□□ 0.24
Npc1O35604 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.58■□□□□ 0.24
Npc1O35604 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Npc1O35604 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npc1O35604 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.58■□□□□ 0.24
Npc1O35604 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npc1O35604 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npc1O35604 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npc1O35604 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Npc1O35604 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npc1O35604 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.57■□□□□ 0.24
Npc1O35604 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npc1O35604 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npc1O35604 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npc1O35604 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npc1O35604 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.57■□□□□ 0.24
Npc1O35604 Mir5130-201ENSMUST00000175160 84 ntBASIC16.57■□□□□ 0.24
Npc1O35604 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Npc1O35604 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npc1O35604 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Npc1O35604 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms