Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11aO35305 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11aO35305 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Gm6433-201ENSMUST00000118634 875 ntBASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Gm18958-201ENSMUST00000174258 762 ntBASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Gm2274-201ENSMUST00000184539 609 ntBASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11aO35305 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Gm9987-201ENSMUST00000069768 567 ntBASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.27■□□□□ 0.52
Tnfrsf11aO35305 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfrsf11aO35305 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfrsf11aO35305 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfrsf11aO35305 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tnfrsf11aO35305 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Gm10566-201ENSMUST00000086739 996 ntBASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms