Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.32□□□□□ -0.28
Tnfsf11O35235 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf11O35235 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tnfsf11O35235 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.31□□□□□ -0.28
Tnfsf11O35235 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfsf11O35235 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfsf11O35235 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf11O35235 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.3□□□□□ -0.28
Tnfsf11O35235 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf11O35235 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Nespas-201ENSMUST00000143738 1083 ntBASIC13.29□□□□□ -0.28
Tnfsf11O35235 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Gm6420-201ENSMUST00000193885 723 ntBASIC13.29□□□□□ -0.28
Tnfsf11O35235 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf11O35235 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Tnfsf11O35235 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.28□□□□□ -0.28
Tnfsf11O35235 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf11O35235 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.27□□□□□ -0.28
Tnfsf11O35235 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms