Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.17■□□□□ 0.02
OtpO09113 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.17■□□□□ 0.02
OtpO09113 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
OtpO09113 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.17■□□□□ 0.02
OtpO09113 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
OtpO09113 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.17■□□□□ 0.02
OtpO09113 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
OtpO09113 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
OtpO09113 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OtpO09113 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
OtpO09113 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
OtpO09113 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
OtpO09113 Gm4974-201ENSMUST00000209974 875 ntBASIC15.16■□□□□ 0.02
OtpO09113 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OtpO09113 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OtpO09113 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OtpO09113 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
OtpO09113 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
OtpO09113 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OtpO09113 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OtpO09113 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
OtpO09113 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
OtpO09113 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.15■□□□□ 0.02
OtpO09113 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.15■□□□□ 0.02
OtpO09113 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.15■□□□□ 0.02
OtpO09113 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
OtpO09113 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.15■□□□□ 0.02
OtpO09113 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.15■□□□□ 0.02
OtpO09113 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
OtpO09113 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
OtpO09113 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
OtpO09113 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OtpO09113 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
OtpO09113 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
OtpO09113 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.14■□□□□ 0.01
OtpO09113 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
OtpO09113 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
OtpO09113 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
OtpO09113 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
OtpO09113 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
OtpO09113 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
OtpO09113 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
OtpO09113 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
OtpO09113 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
OtpO09113 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
OtpO09113 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.13■□□□□ 0.01
OtpO09113 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.13■□□□□ 0.01
OtpO09113 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
OtpO09113 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
OtpO09113 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OtpO09113 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OtpO09113 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
OtpO09113 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms