Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2b3O09039 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sh2b3O09039 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2b3O09039 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.14■□□□□ 0.01
Sh2b3O09039 Gm23634-201ENSMUST00000175071 91 ntBASIC15.14■□□□□ 0.01
Sh2b3O09039 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.14■□□□□ 0.01
Sh2b3O09039 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Sh2b3O09039 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2b3O09039 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sh2b3O09039 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2b3O09039 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.14■□□□□ 0.01
Sh2b3O09039 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh2b3O09039 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.13■□□□□ 0.01
Sh2b3O09039 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Sh2b3O09039 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.13■□□□□ 0.01
Sh2b3O09039 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.13■□□□□ 0.01
Sh2b3O09039 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.13■□□□□ 0.01
Sh2b3O09039 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.13■□□□□ 0.01
Sh2b3O09039 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sh2b3O09039 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Sh2b3O09039 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh2b3O09039 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sh2b3O09039 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.13■□□□□ 0.01
Sh2b3O09039 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.12■□□□□ 0.01
Sh2b3O09039 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sh2b3O09039 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.12■□□□□ 0.01
Sh2b3O09039 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sh2b3O09039 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.12■□□□□ 0.01
Sh2b3O09039 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2b3O09039 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sh2b3O09039 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sh2b3O09039 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sh2b3O09039 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sh2b3O09039 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Gm18032-201ENSMUST00000222541 538 ntBASIC15.11■□□□□ 0.01
Sh2b3O09039 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Gm10819-201ENSMUST00000099988 561 ntBASIC15.11■□□□□ 0.01
Sh2b3O09039 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.11■□□□□ 0.01
Sh2b3O09039 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.11■□□□□ 0.01
Sh2b3O09039 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.11■□□□□ 0.01
Sh2b3O09039 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sh2b3O09039 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.11■□□□□ 0.01
Sh2b3O09039 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
Sh2b3O09039 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2b3O09039 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.11■□□□□ 0.01
Sh2b3O09039 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sh2b3O09039 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2b3O09039 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2b3O09039 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2b3O09039 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh2b3O09039 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms