Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.64■□□□□ 0.41
Ebf3O08791 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ebf3O08791 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ebf3O08791 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ebf3O08791 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ebf3O08791 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ebf3O08791 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ebf3O08791 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf3O08791 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.63■□□□□ 0.41
Ebf3O08791 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf3O08791 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf3O08791 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf3O08791 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.63■□□□□ 0.41
Ebf3O08791 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ebf3O08791 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.63■□□□□ 0.41
Ebf3O08791 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ebf3O08791 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf3O08791 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf3O08791 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf3O08791 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf3O08791 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf3O08791 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf3O08791 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ebf3O08791 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ebf3O08791 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.62■□□□□ 0.41
Ebf3O08791 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.62■□□□□ 0.41
Ebf3O08791 Gm17808-201ENSMUST00000200859 894 ntBASIC17.62■□□□□ 0.41
Ebf3O08791 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ebf3O08791 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ebf3O08791 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf3O08791 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.62■□□□□ 0.41
Ebf3O08791 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Ebf3O08791 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.61■□□□□ 0.41
Ebf3O08791 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.61■□□□□ 0.41
Ebf3O08791 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ebf3O08791 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf3O08791 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ebf3O08791 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ebf3O08791 Gm11355-201ENSMUST00000121120 306 ntBASIC17.6■□□□□ 0.41
Ebf3O08791 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Ebf3O08791 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ebf3O08791 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ebf3O08791 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.6■□□□□ 0.41
Ebf3O08791 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ebf3O08791 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Ebf3O08791 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ebf3O08791 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.6■□□□□ 0.41
Ebf3O08791 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf3O08791 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Ebf3O08791 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf3O08791 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ebf3O08791 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf3O08791 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf3O08791 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.59■□□□□ 0.41
Ebf3O08791 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.59■□□□□ 0.41
Ebf3O08791 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf3O08791 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf3O08791 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf3O08791 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Ebf3O08791 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf3O08791 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.59■□□□□ 0.41
Ebf3O08791 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf3O08791 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms