Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Gm17661-201ENSMUST00000170317 270 ntBASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Gm37025-201ENSMUST00000195159 829 ntBASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Tnfrsf11bO08712 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf11bO08712 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf11bO08712 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf11bO08712 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf11bO08712 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf11bO08712 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf11bO08712 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf11bO08712 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf11bO08712 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.27■□□□□ 0.36
Tnfrsf11bO08712 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf11bO08712 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Tnfrsf11bO08712 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfrsf11bO08712 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfrsf11bO08712 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfrsf11bO08712 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf11bO08712 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf11bO08712 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.24■□□□□ 0.35
Tnfrsf11bO08712 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms