Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.98■□□□□ 0.63
B020004C17RikJ3QP07 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
B020004C17RikJ3QP07 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
B020004C17RikJ3QP07 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
B020004C17RikJ3QP07 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
B020004C17RikJ3QP07 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
B020004C17RikJ3QP07 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
B020004C17RikJ3QP07 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
B020004C17RikJ3QP07 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
B020004C17RikJ3QP07 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
B020004C17RikJ3QP07 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Gm27867-201ENSMUST00000184778 125 ntBASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Gm37935-201ENSMUST00000192012 982 ntBASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
B020004C17RikJ3QP07 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Gm1401-201ENSMUST00000122048 772 ntBASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.95■□□□□ 0.62
B020004C17RikJ3QP07 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Gm25925-201ENSMUST00000158314 306 ntBASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
B020004C17RikJ3QP07 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
B020004C17RikJ3QP07 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
B020004C17RikJ3QP07 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
B020004C17RikJ3QP07 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
B020004C17RikJ3QP07 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms