Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NpcdF8VQB8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NpcdF8VQB8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.39■□□□□ 0.85
NpcdF8VQB8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NpcdF8VQB8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.39■□□□□ 0.85
NpcdF8VQB8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.39■□□□□ 0.85
NpcdF8VQB8 Gm12350-201ENSMUST00000121208 462 ntBASIC20.39■□□□□ 0.85
NpcdF8VQB8 Gm5264-201ENSMUST00000190584 848 ntBASIC20.39■□□□□ 0.85
NpcdF8VQB8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NpcdF8VQB8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.39■□□□□ 0.85
NpcdF8VQB8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.39■□□□□ 0.85
NpcdF8VQB8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NpcdF8VQB8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.39■□□□□ 0.85
NpcdF8VQB8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.39■□□□□ 0.85
NpcdF8VQB8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.39■□□□□ 0.85
NpcdF8VQB8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NpcdF8VQB8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Gm5364-201ENSMUST00000216789 889 ntBASIC20.38■□□□□ 0.85
NpcdF8VQB8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NpcdF8VQB8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NpcdF8VQB8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NpcdF8VQB8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NpcdF8VQB8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NpcdF8VQB8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NpcdF8VQB8 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.37■□□□□ 0.85
NpcdF8VQB8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NpcdF8VQB8 Rarb-207ENSMUST00000225921 2756 ntBASIC20.37■□□□□ 0.85
NpcdF8VQB8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NpcdF8VQB8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NpcdF8VQB8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NpcdF8VQB8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.37■□□□□ 0.85
NpcdF8VQB8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NpcdF8VQB8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NpcdF8VQB8 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.37■□□□□ 0.85
NpcdF8VQB8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Gm11779-201ENSMUST00000118541 368 ntBASIC20.36■□□□□ 0.85
NpcdF8VQB8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Gm43575-201ENSMUST00000196420 516 ntBASIC20.36■□□□□ 0.85
NpcdF8VQB8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.36■□□□□ 0.85
NpcdF8VQB8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NpcdF8VQB8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NpcdF8VQB8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NpcdF8VQB8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NpcdF8VQB8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NpcdF8VQB8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.35■□□□□ 0.85
NpcdF8VQB8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NpcdF8VQB8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NpcdF8VQB8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.35■□□□□ 0.85
NpcdF8VQB8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NpcdF8VQB8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NpcdF8VQB8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Gm10060-201ENSMUST00000212002 111 ntBASIC20.34■□□□□ 0.85
NpcdF8VQB8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.34■□□□□ 0.85
NpcdF8VQB8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NpcdF8VQB8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
NpcdF8VQB8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NpcdF8VQB8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms