Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.26■□□□□ 0.35
Ccdc149F6V035 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc149F6V035 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc149F6V035 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.25■□□□□ 0.35
Ccdc149F6V035 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Gm27741-201ENSMUST00000185060 237 ntBASIC17.25■□□□□ 0.35
Ccdc149F6V035 Gm45328-201ENSMUST00000210942 917 ntBASIC17.25■□□□□ 0.35
Ccdc149F6V035 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc149F6V035 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.24■□□□□ 0.35
Ccdc149F6V035 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.24■□□□□ 0.35
Ccdc149F6V035 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc149F6V035 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.23■□□□□ 0.35
Ccdc149F6V035 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccdc149F6V035 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc149F6V035 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc149F6V035 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc149F6V035 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc149F6V035 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc149F6V035 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc149F6V035 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc149F6V035 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc149F6V035 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc149F6V035 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc149F6V035 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc149F6V035 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc149F6V035 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.22■□□□□ 0.35
Ccdc149F6V035 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.22■□□□□ 0.35
Ccdc149F6V035 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc149F6V035 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Rarb-207ENSMUST00000225921 2756 ntBASIC17.21■□□□□ 0.35
Ccdc149F6V035 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Gm8969-201ENSMUST00000199694 526 ntBASIC17.21■□□□□ 0.35
Ccdc149F6V035 Gm18669-201ENSMUST00000216049 778 ntBASIC17.21■□□□□ 0.35
Ccdc149F6V035 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc149F6V035 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc149F6V035 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc149F6V035 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc149F6V035 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ccdc149F6V035 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms