Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube4aE9Q735 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Gm7461-201ENSMUST00000058918 827 ntBASIC20.42■□□□□ 0.86
Ube4aE9Q735 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube4aE9Q735 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.41■□□□□ 0.86
Ube4aE9Q735 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.41■□□□□ 0.86
Ube4aE9Q735 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube4aE9Q735 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube4aE9Q735 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube4aE9Q735 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube4aE9Q735 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube4aE9Q735 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.41■□□□□ 0.86
Ube4aE9Q735 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube4aE9Q735 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube4aE9Q735 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube4aE9Q735 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube4aE9Q735 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ube4aE9Q735 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4aE9Q735 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4aE9Q735 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4aE9Q735 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.39■□□□□ 0.85
Ube4aE9Q735 Gm12895-201ENSMUST00000122214 226 ntBASIC20.39■□□□□ 0.85
Ube4aE9Q735 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.39■□□□□ 0.85
Ube4aE9Q735 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.39■□□□□ 0.85
Ube4aE9Q735 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4aE9Q735 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4aE9Q735 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4aE9Q735 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4aE9Q735 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4aE9Q735 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4aE9Q735 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube4aE9Q735 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.38■□□□□ 0.85
Ube4aE9Q735 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.38■□□□□ 0.85
Ube4aE9Q735 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.38■□□□□ 0.85
Ube4aE9Q735 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ube4aE9Q735 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ube4aE9Q735 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4aE9Q735 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4aE9Q735 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.37■□□□□ 0.85
Ube4aE9Q735 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ube4aE9Q735 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ube4aE9Q735 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms