Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Herc1E9PZP8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.55□□□□□ -0.88
Herc1E9PZP8 AC155252.2-201ENSMUST00000226946 680 ntBASIC9.55□□□□□ -0.88
Herc1E9PZP8 AC154757.1-201ENSMUST00000228289 336 ntBASIC9.55□□□□□ -0.88
Herc1E9PZP8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC9.55□□□□□ -0.88
Herc1E9PZP8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.55□□□□□ -0.88
Herc1E9PZP8 AC238811.3-201ENSMUST00000225422 709 ntBASIC9.55□□□□□ -0.88
Herc1E9PZP8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Golph3-205ENSMUST00000228671 2842 ntBASIC9.54□□□□□ -0.88
Herc1E9PZP8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC9.54□□□□□ -0.88
Herc1E9PZP8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC9.54□□□□□ -0.88
Herc1E9PZP8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Herc1E9PZP8 AC154572.2-201ENSMUST00000225105 997 ntBASIC9.54□□□□□ -0.88
Herc1E9PZP8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC9.54□□□□□ -0.88
Herc1E9PZP8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC9.54□□□□□ -0.88
Herc1E9PZP8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Herc1E9PZP8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC9.53□□□□□ -0.88
Herc1E9PZP8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.53□□□□□ -0.88
Herc1E9PZP8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Gm27618-201ENSMUST00000183671 60 ntBASIC9.53□□□□□ -0.88
Herc1E9PZP8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Gm17271-201ENSMUST00000165535 355 ntBASIC9.53□□□□□ -0.88
Herc1E9PZP8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Herc1E9PZP8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Herc1E9PZP8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.88
Herc1E9PZP8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Herc1E9PZP8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Herc1E9PZP8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Herc1E9PZP8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.52□□□□□ -0.89
Herc1E9PZP8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms