Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc28a1E9PXX9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc28a1E9PXX9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Gm11643-201ENSMUST00000119578 864 ntBASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Gm44549-201ENSMUST00000208351 577 ntBASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Gm10033-202ENSMUST00000211874 928 ntBASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Gm6365-201ENSMUST00000054711 744 ntBASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.05■□□□□ 0.16
Slc28a1E9PXX9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc28a1E9PXX9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc28a1E9PXX9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc28a1E9PXX9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc28a1E9PXX9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc28a1E9PXX9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc28a1E9PXX9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc28a1E9PXX9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc28a1E9PXX9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms