Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Mir8112-201ENSMUST00000184382 131 ntBASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.82■□□□□ 0.12
Pcdh17E9PXF0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh17E9PXF0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh17E9PXF0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Gm5587-201ENSMUST00000206270 674 ntBASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh17E9PXF0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Gm14859-201ENSMUST00000117752 357 ntBASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Gm9013-201ENSMUST00000132939 882 ntBASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh17E9PXF0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms