Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm5878E9PUB3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm5878E9PUB3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.77□□□□□ -0.36
Gm5878E9PUB3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Gm15378-201ENSMUST00000121894 207 ntBASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5878E9PUB3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Gm5643-201ENSMUST00000117081 966 ntBASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5878E9PUB3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Gm37856-201ENSMUST00000191634 999 ntBASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5878E9PUB3 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Trmt13-210ENSMUST00000198454 880 ntBASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm5878E9PUB3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms