Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Gm15467-201ENSMUST00000120582 445 ntBASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 CT009713.7-201ENSMUST00000224689 571 ntBASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hfm1D3Z4R1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Hfm1D3Z4R1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Hfm1D3Z4R1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Hfm1D3Z4R1 Gm4995-201ENSMUST00000117247 432 ntBASIC23.87■■□□□ 1.41
Hfm1D3Z4R1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC23.87■■□□□ 1.41
Hfm1D3Z4R1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hfm1D3Z4R1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Hfm1D3Z4R1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hfm1D3Z4R1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hfm1D3Z4R1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Hfm1D3Z4R1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Hfm1D3Z4R1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Hfm1D3Z4R1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Gm43575-201ENSMUST00000196420 516 ntBASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hfm1D3Z4R1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 CT943659.1-201ENSMUST00000215459 326 ntBASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Hfm1D3Z4R1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hfm1D3Z4R1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hfm1D3Z4R1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hfm1D3Z4R1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Hfm1D3Z4R1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Hfm1D3Z4R1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hfm1D3Z4R1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Hfm1D3Z4R1 Gm13418-201ENSMUST00000119097 944 ntBASIC23.83■■□□□ 1.4
Hfm1D3Z4R1 Gm4535-201ENSMUST00000182274 558 ntBASIC23.83■■□□□ 1.4
Hfm1D3Z4R1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Hfm1D3Z4R1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC23.83■■□□□ 1.4
Hfm1D3Z4R1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Hfm1D3Z4R1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Hfm1D3Z4R1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Hfm1D3Z4R1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Hfm1D3Z4R1 Gm10355-201ENSMUST00000097146 517 ntBASIC23.83■■□□□ 1.4
Hfm1D3Z4R1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC23.83■■□□□ 1.4
Hfm1D3Z4R1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Hfm1D3Z4R1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hfm1D3Z4R1 Gm23935-201ENSMUST00000102303 57 ntBASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms