Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn2B2RVW2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Gm43514-201ENSMUST00000198852 424 ntBASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Gm6443-201ENSMUST00000203599 874 ntBASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn2B2RVW2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 AW822252-206ENSMUST00000208904 237 ntBASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Clrn2B2RVW2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clrn2B2RVW2 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.64■□□□□ 0.73
Clrn2B2RVW2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.64■□□□□ 0.73
Clrn2B2RVW2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn2B2RVW2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn2B2RVW2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn2B2RVW2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Clrn2B2RVW2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn2B2RVW2 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.64■□□□□ 0.73
Clrn2B2RVW2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.64■□□□□ 0.73
Clrn2B2RVW2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn2B2RVW2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn2B2RVW2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn2B2RVW2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clrn2B2RVW2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn2B2RVW2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn2B2RVW2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Gm10052-201ENSMUST00000168019 960 ntBASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Gm7729-201ENSMUST00000050143 801 ntBASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn2B2RVW2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clrn2B2RVW2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clrn2B2RVW2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms