Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rrn3B2RS91 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rrn3B2RS91 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.13■□□□□ 0.33
Rrn3B2RS91 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrn3B2RS91 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.13■□□□□ 0.33
Rrn3B2RS91 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Il3ra-202ENSMUST00000223589 738 ntBASIC17.12■□□□□ 0.33
Rrn3B2RS91 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrn3B2RS91 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.11■□□□□ 0.33
Rrn3B2RS91 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.11■□□□□ 0.33
Rrn3B2RS91 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Gm2274-201ENSMUST00000184539 609 ntBASIC17.11■□□□□ 0.33
Rrn3B2RS91 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.11■□□□□ 0.33
Rrn3B2RS91 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.11■□□□□ 0.33
Rrn3B2RS91 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrn3B2RS91 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rrn3B2RS91 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrn3B2RS91 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrn3B2RS91 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrn3B2RS91 Gm13836-201ENSMUST00000121159 501 ntBASIC17.1■□□□□ 0.33
Rrn3B2RS91 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrn3B2RS91 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rrn3B2RS91 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrn3B2RS91 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rrn3B2RS91 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrn3B2RS91 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Rrn3B2RS91 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrn3B2RS91 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.09■□□□□ 0.33
Rrn3B2RS91 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rrn3B2RS91 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Rrn3B2RS91 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rrn3B2RS91 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rrn3B2RS91 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rrn3B2RS91 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rrn3B2RS91 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rrn3B2RS91 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rrn3B2RS91 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rrn3B2RS91 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rrn3B2RS91 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rrn3B2RS91 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rrn3B2RS91 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rrn3B2RS91 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rrn3B2RS91 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.08■□□□□ 0.32
Rrn3B2RS91 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms