Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Idnk-204ENSMUST00000226010 1898 ntBASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd2l1A2A259 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
Pkd2l1A2A259 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Gm13559-201ENSMUST00000120476 863 ntBASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd2l1A2A259 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Gm11539-201ENSMUST00000119837 557 ntBASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Gm13436-201ENSMUST00000120418 567 ntBASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Gm3375-201ENSMUST00000203929 796 ntBASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pkd2l1A2A259 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd2l1A2A259 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pkd2l1A2A259 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.6■□□□□ 0.25
Pkd2l1A2A259 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.6■□□□□ 0.25
Pkd2l1A2A259 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pkd2l1A2A259 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pkd2l1A2A259 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pkd2l1A2A259 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pkd2l1A2A259 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pkd2l1A2A259 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Pkd2l1A2A259 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pkd2l1A2A259 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms