Protein–RNA interactions for Protein: A1L0T3

Ssc4d, Scavenger receptor cysteine-rich domain-containing group B protein, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc4dA1L0T3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ssc4dA1L0T3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssc4dA1L0T3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssc4dA1L0T3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ssc4dA1L0T3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssc4dA1L0T3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Gm27742-201ENSMUST00000184667 60 ntBASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Gm45328-201ENSMUST00000210942 917 ntBASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssc4dA1L0T3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Gm28033-201ENSMUST00000184224 96 ntBASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Gm18115-201ENSMUST00000221209 621 ntBASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssc4dA1L0T3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Gm27357-201ENSMUST00000183754 135 ntBASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssc4dA1L0T3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ssc4dA1L0T3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms